Research Article
Open Access
Expression Profile of Pro-Inflammatory
Cytokines in Head-Kidney Leucocytes of
Rohu Following Stimulation with Poly
I:C
Pujarini Dash and PK Sahoo*
Fish Health Management Division, ICAR-Central Institute of Freshwater Aquaculture, Kausalyaganga, Bhubaneswar, India
*Corresponding author: Dr. PK Sahoo, Ph.D, Principal Scientist & ICAR National Fellow, Fish Health Management Division, ICAR-CIFA,Kausalyaganga, Bhubaneswar, India-751002, Tel: +91-674-246546; Fax: +91-674-2465407; E-mail:
@
Received: January 30, 2017; Accepted: March 14, 2017; Published: May 09, 2017
Citation: Pujarini Dash, PK Sahoo, (2017) Expression Profile of Pro-Inflammatory Cytokines in Head-Kidney Leucocytes of Rohu Following Stimulation with Poly I:C. Int J Marine Biol Res 2(1):1-6. DOI: 10.15226/24754706/2/1/00109
Abstract
IL (interleukin)-6, TNF (tumor necrosis factor)-α, IL-1β and IL-8
are pro-inflammatory cytokines which augment host inflammatory
reactions in response to multiple stresses or infections. In this study,
we analyzed expression profile of these cytokines in head kidney
leucocytes (HKL) isolated from healthy rohu (Labeo rohita) juveniles
in response to poly I:C (50 μg/ml), a synthetic dsRNA virus analog
stimulation. RNA was isolated from stimulated HKLs at 0, 1, 3, 6, 12,
24, and 72 and 96 h post-stimulation (hps) and the expression profile
of IL-6, TNF-α, IL-1β and IL-8 was studied using qPCR. IL-6 expression
was found to be significantly up-regulated at 72 hps whereas higher
level of TNF-α was evident at 96 hps. With regard to IL-8 and IL-1β, a
similar kind of expression pattern was observed where levels of both
cytokines were higher at 24 hps. As activation of pro-inflammatory
cytokine cascade against infection is considered as a marker of early
immunity, induction of cytokine levels at or after 24 hps in rohu HKLs
following poly I:C stimulation suggested the potential inflammatory
role played by these cytokines during viral infection in fish.
Keywords: Cytokine Genes; Expression Analysis; Labeo rohita; Poly I:C.
Keywords: Cytokine Genes; Expression Analysis; Labeo rohita; Poly I:C.
Introduction
The fish do have both (humoral and cellular) innate and
specific defense mechanisms, but their immune system is poorly
understood at the molecular level [1]. The characterization
of the fish immune system is essential for understanding
host-pathogen interaction, development of preventive and
control measures through vaccinations, immunomodulations
or production of disease resistant fish. Cytokines are protein
molecules, which regulate the nature of immune responses and
play key role in growth, differentiation and activation of various
immune molecules. They are secreted upon activation of immune
cells induced by various pathogens viz., bacterial, parasitic and
viral components. The expression of several cytokine genes
in fish in response to pathogens exposure is a critical criterion
for measuring immune responses in fish to pathogens [2].
Interleukin 6 (IL-6), interleukin 8 (IL-8), interleukin 1β (IL-
1β) and tumor necrosis factor α (TNF-α) are pro-inflammatory
cytokines which have been proven to be extremely important
in fish during inflammatory responses evoked by pathogen
[3]. IL-6 is a pleiotropic cytokine, which regulates acute phase
reactions, hematopoietic, inflammation and other various
immune responses [4]. Expression of IL-6 gene was found
to be stimulated by various inducers viz., lipopolysaccharide
(LPS), poly I:C and phorbol 12-myristate 13-acetate (PMA) in
both fish and mammals [5]. In Japanese flounder, up-regulation
in IL-6 transcript level was observed following challenge with
Edwardsiella tarda in kidney and spleen which are expected to
harbor lymphocyte populations [4]. Induction in IL-6 level was
also evident in poly I:C treated kidney tissues of zebrafish during
the first hours of injection which indicates its role in antiviral
immunity [6]. IL-8, the first known chemokine or called as CXCL8,
plays very important role in initiation of acute inflammation by
recruiting immune molecules to the site of infection [7]. In fish,
increased level of IL-8 was reported following injection with LPS,
poly I:C or infection with pathogenic bacteria which suggests
the involvement of this cytokine in fish immune response [7].
TNF-α and IL-1β, two important pro-inflammatory cytokines
also have been reported to play key roles in anti-bacterial, antiparasitic
and anti-viral immunity in fish [4, 8, 9]. Despite their
vital role in pathogen induced host immune response, studies
on these cytokines have not been discussed in one important
Indian major carp species, rohu (Labeo rohita). Currently, this
fish species represents one of the valuable aquaculture products
in India which is highly on demand among consumers due to
its delicious taste and high nutritional value [10]. However,
disease problem associated with this fish remains a major
constraint for its sustainable production. Though, studies on
expression pattern of immune molecules following different
stimuli and downstream pathways are necessary to understand
host-pathogen interaction, research on rohu immune system, in
particular is limited. Polyinosinicpolycytidylic acid (poly I:C), a
double stranded RNA virus analog mimics viral infection and in
fish it has been reported to induce pro-inflammatory responses
and anti-microbial activity [11]. It has been successfully used in
vivo as well as in vitro to study expression pattern of cytokines in
response to viral infection in several fish species [12-15]. In this
study, we report in vitro expression analysis of pro-inflammatory
cytokines IL-6, IL-8, IL-1β and TNFα in head-kidney leucocytes
(important immune competent organ of fish) of rohu following
stimulation with poly I:C and discuss its possible use in screening
of immunostimulants or their use as inflammatory markers in
viral immunity studies.
Methods
Experimental animals
Rohu (L. rohita) juveniles (average weight 70.0 ±
5.2 g) were obtained from the farm of the Central Institute of
Freshwater Aquaculture (CIFA), Bhubaneswar, India. Fish were
acclimatized in fiber-reinforced plastic tanks of 500 L capacity
for two weeks before conducting the experiment. About onetenth
of tank water was exchanged daily and the basic physicochemical
water parameters were measured regularly to maintain
the optimum water quality. The temperature in water tanks was
found to be 25-28 °C throughout the experimental period. Fish
were fed with commercial pellet feed (ACI Godrej Pvt. Ltd., India)
at 2.5% of body weight in two divided doses.
Isolation of head kidney leucocytes (HKLs)
For isolating HKLs, fish were sacrificed with overdose
of anaesthesia (MS222, Sigma-Aldrich Chemicals Co., USA) and
dissected. Head-kidney tissues were collected in 1.5 ml tubes
containing 1 ml Leibovitz L-15 medium supplemented with
0.1% gentamycin, 18 mM NaHCO3, 25 mM HEPES, pH 7.4 (Sigma-
Aldrich, USA) and kept in ice. Then the tissues were placed on
cell strainer (100 μm dia, BD Bioscience) and meshed with the
above medium. The minced tissues were re-suspended in 3 ml
medium and layered slowly over 51% Percoll gradient (Sigma-
Aldrich, USA). Samples were centrifuged at 500 x g for 45 min at
4 °C. The leucocyte band was carefully pipetted out to another
tube containing 2-3 ml of L-15 medium. The supernatant was discarded after centrifuging the cells at 800 x g for 10 min at
4 °C and pellet was re-suspended in 1 ml medium and kept on
ice. After viability checking and cell counting using Trypan blue
(Sigma-Aldrich, USA), 2×107 leucocyte cells were seeded into
each well of cell culture plate.
Stimulation of HKLs with poly I:C for expression study
Cells were treated with poly I:C (50 μg/ml, Sigma-
Aldrich, USA) and incubated at 28 °C. Each treatment was carried
out in triplicate and un-treated cells served as control. Cells were
collected by scrapping thoroughly at 0, 1, 3, 6, 12, 24, and 72 and
96 h post-stimulation (hps) and centrifuged at 11,000 x g at 10
°C for five minutes. Supernatant was discarded and cells were
resuspended in 1 ml TRI reagent (Sigma-Aldrich, USA), mixed
well through vortex for a minute and stored at – 70 °C for RNA
extraction.
RNA extraction and cDNA synthesis
RNA extraction was carried out using TRI reagent
following manufacturer’s instruction and RNA samples
were stored at -70 °C. Before synthesizing cDNA, quality and
concentration of RNA samples were checked through NanoDrop
ND 1000 (NanoDrop Technologies Inc., USA) by measuring
optical density at 260 and 280 nm, and 1 μg of RNA was treated
with DNase I (Fermentas, Canada) according to manufacturer’s
instruction. To this reaction mixture 1 μl (1 U/μl) of RNase
inhibitor (Fermentas, Canada) was added in order to inhibit
the RNase activity. All these DNase I-treated RNA samples
were further processed for cDNA synthesis using MMLV-RT
(Sigma-Aldrich, USA) following manufacturer’s instruction. The
synthesized cDNA samples were stored at -20°C until further use.
PCR, cloning and cytokine expression analysis
qPCR was carried out for all the four cytokine genes
using pairs of published gene specific (TNF-α) primers [16] or
self designed primers before (using primer premier 5, version 5.0,
Premier Biosoft International, Palo Alto, CA) for each gene. Primer
pairs for IL-8 and IL-1β were designed from available sequences
of L. rohita IL-8 (HM363518.1) and IL-1β (AM932525.1) in NCBI
database whereas primers for IL-6 gene were derived from
mRNA seq of rohu IL-6 contig 88018[17]. Primer sequences and
their optimum annealing temperatures are given in Table 1.
Table 1: Primers used in this study with their annealing temperature and size of amplicon produced
Target gene |
Primer sequence (5'-3') |
Annealing temperature (°C) |
Size of PCR amplicon (bp) |
Reference |
IL-6 |
F-GGACCGCTTTGAAACTCT |
54.3 |
212 |
17 |
R-GCTCCCTGTAACGCTTGT |
|
|
||
TNF- α |
F-CCAGGCTTTCACTTCAGG |
51.6 |
181 |
16 |
R-GCCATAGGAATCGGAGTAG |
|
|
||
IL-8 |
F-AAAGGGTTCTTACTGG |
48 |
170 |
S.D., N.S. |
R-TTTAGACATCTCGGACT |
|
|
||
IL-1β |
F-GTGACACTGACTGGAGGAA |
54 |
164 |
S.D., N.S. |
R-AGTTTGGGCAAGGAAGA |
|
|
||
β-actin |
F-GACTTCGAGCAGGAGATGG |
55.3 |
138 |
19 |
R-CAAGAAGGATGGCTGGAACA |
|
|
S.D. – self-designed, N.S.- not submitted
All the amplifications were carried out using 1 μl of reversetranscribed
cDNA as detailed elsewhere [18]. The generated
PCR products were purified by PCR product purification kit
(Bangalore Genei, Bangalore) and were cloned into T cloning
vector using an instant cloning kit (Bangalore Genei, Bangalore)
according to manufacturer’s instructions. Three positive clones
were sequenced and bioinformatics analysis was carried out for
confirmation of the sequences (data not shown).
PCR reaction was carried out in a Light Cycler 480 (Roche, Germany) using Light Cycler 480 SYBR Green I master reaction mix (Roche, Germany) following the manufacturer’s instructions. Briefly, a reaction mixture of 10 μl was prepared using 1 μl cDNA, 5 μl of 2 × Light Cycler SYBR Green I mix, 1 μl of each primer, and 2 μl of water provided in the kit. The qPCR program consisted of pre-denaturation of 95 °C for 10 min and 45 cycles of amplification at 95 °C for 10 sec, annealing temperature (Table 1) for 10 sec and 72 °C for 10 sec. Each sample was taken in duplicate and negative control (sample without cDNA) was run in each plate. Housekeeping gene β-actin was run as a calibrator [19]. Specificity of qPCR was checked through melt curve analysis at 95 °C for 10 sec, 65 °C for 1 min and 95 °C for 1 min.
PCR reaction was carried out in a Light Cycler 480 (Roche, Germany) using Light Cycler 480 SYBR Green I master reaction mix (Roche, Germany) following the manufacturer’s instructions. Briefly, a reaction mixture of 10 μl was prepared using 1 μl cDNA, 5 μl of 2 × Light Cycler SYBR Green I mix, 1 μl of each primer, and 2 μl of water provided in the kit. The qPCR program consisted of pre-denaturation of 95 °C for 10 min and 45 cycles of amplification at 95 °C for 10 sec, annealing temperature (Table 1) for 10 sec and 72 °C for 10 sec. Each sample was taken in duplicate and negative control (sample without cDNA) was run in each plate. Housekeeping gene β-actin was run as a calibrator [19]. Specificity of qPCR was checked through melt curve analysis at 95 °C for 10 sec, 65 °C for 1 min and 95 °C for 1 min.
Data analysis
Quantification cycle values (CQ) were derived using
second derivative maximum method for absolute quantification
analysis using Light Cycler 480 software [20]. Calculation of
N-fold differential expression was carried out using comparative
CQ method [21]. Mean value of untreated samples at 0 h was
taken as calibrator which ΔCq value (average Cq of sample –
average Cq of β-actin) was subtracted from ΔCq of each sample
to get ΔΔCq. Fold expression of each sample relative to calibrator
was calculated as 2-ΔΔCq. The average fold expression of triplicate
samples of each time period was presented as mean ± S.E.
Significant difference between different time points was analyzed
by one-way ANOVA followed by Duncan’s multiple range tests (p
≤ 0.05, statistically significant).
Results
Transcriptional changing of pro-inflammatory
cytokines in rohu HKLs following stimulation with poly I:C is
presented in Fig. 1.
Figure 1a:
Figure 1b:
Figure 1c:
Figure 1d:Variation in expression pattern of cytokines in head-kidney
leucocytes of rohu following induction with poly I: C. The fold difference
was calculated as 2-ΔΔCq, where ΔΔCq = (ΔCq sample - ΔCq
calibrator) and ΔCq= (Cq value of target gene - Cq value of β-actin). The
average Cq value of the un-induced leucocytes was used as calibrator
in the analysis.
Though very negligible level of expression of IL-6 was detected
in un-induced HKLs, the transcript level remarkably raised at 3
hps and the same reached its peak at 72 hps (Fig. 1a). A similar
pattern of expression was observed in case of IL-8 and IL-1β
transcripts where significant up-regulation of both the genes
was observed at 24 hps after a transient rise at 3 hps (Fig. 1b
and Fig. 1c). Low expression of TNF-α was again seen up to 12
hps including in uninduced HKLs. However, significantly higher
expression of this cytokine gene was found at 96 hps (Fig. 1d).
Discussion
Pro-inflammatory cytokines enable organisms to
generate immunity in response to microbial invasion and
inflammation [13]. Although primary investigations in rohu have
contributed to extend our knowledge on role of various immune
molecules during infections, responses related to cytokines
remained unsolved in this species. Herein, using poly I:C in vitro,
we demonstrated that this viral analog is capable of inducing proinflammatory
cytokines in HKLs of rohu which might mimic viral
infection or stimulation in true sense in vivo.
In several fish species, expression of IL-6 has been found to be induced in immune tissues (viz., head-kidney, spleen) by a number of stimuli viz., LPS, peptidoglycan, DNA, poly I:C and IL-1β [22]. In the present study, significant up-regulation of IL-6 in rohu HKLs at 72 hps with poly I:C might be due to the contribution of prior induction of IL-1β (increased at 24 hps as observed here). Induction of IL-6 level by a variety of viruses as well as poly I:C in diploid fibroblasts and in leucocyte cultures in vitro in human and mouse suggests its role in virus induced immunity [5]. In zebrafish kidney tissues injected with poly I:C, elevated level of IL-6 was maintained up to 6 h post-injection after which the level returned to the baseline value [6]. However, upregulation of IL-6 level at 72 hps in rohu indicates a late cytokine response to the viral analog. IL-1β was the first cytokine to be identified in fish and both IL-8 and IL-1β have been reported to be stimulated in response to viral imitator in a number of fish species [14, 23, and 24]. In the present study, induction of both IL- 1β and IL-8 in HKLs of rohu at 24 hps with poly I:C might be due to the synergistic relationship shared by these two cytokines. In spleen of large yellow croaker, IL-8 level was found to be elevated at 3-6 hps whereas in head-kidney the level was higher from 12- 24 hps with poly I:C [7]. Positive stimulatory effect of poly I:C on IL-1β was also described in human dendritic cells and murine macrophage cell lines [25]. IL-8 in fish has been proved to mediate stimulated migration of neutrophils, macrophages, peripheral blood leucocytes and head-kidney leucocytes [26, 27]. Our result suggested that rohu IL-8 might play an important role in headkidney during viral infection by attracting immune cells to the site. An up-regulated TNF-β at 96 hps in rohu HKLs indicated a late response of this molecule to the viral imitator in comparison to other cytokines. However, in addition to interferon mediated anti-viral immunity, viral infection also induces expression of TNF and other chemokines [9]. Poly I:C, the synthetic analog of double stranded RNA virus is recognized by toll-like receptor 3 (TLR3) which activates a number of signal transduction pathways and upregulates an array of immune genes [28]. In in silico analysis, rohu TLR3 has been found to possess key binding domains for poly I: C and dsRNA of fish reovirus [29]. Therefore, it is possible that rohu TLR3 alone or along with other TLR homologues might play a crucial role in recognizing poly I:C and regulating expression level of cytokines. Since IL-6 together with TNF-α and IL-1β constitutes the group of first cytokines to be produced in host upon exposure to pathogen attack, their expression including that of IL-8 at almost 24 hps or after that indicates a late initiation of cytokine cascade in rohu HKLs upon viral infection.
In several fish species, expression of IL-6 has been found to be induced in immune tissues (viz., head-kidney, spleen) by a number of stimuli viz., LPS, peptidoglycan, DNA, poly I:C and IL-1β [22]. In the present study, significant up-regulation of IL-6 in rohu HKLs at 72 hps with poly I:C might be due to the contribution of prior induction of IL-1β (increased at 24 hps as observed here). Induction of IL-6 level by a variety of viruses as well as poly I:C in diploid fibroblasts and in leucocyte cultures in vitro in human and mouse suggests its role in virus induced immunity [5]. In zebrafish kidney tissues injected with poly I:C, elevated level of IL-6 was maintained up to 6 h post-injection after which the level returned to the baseline value [6]. However, upregulation of IL-6 level at 72 hps in rohu indicates a late cytokine response to the viral analog. IL-1β was the first cytokine to be identified in fish and both IL-8 and IL-1β have been reported to be stimulated in response to viral imitator in a number of fish species [14, 23, and 24]. In the present study, induction of both IL- 1β and IL-8 in HKLs of rohu at 24 hps with poly I:C might be due to the synergistic relationship shared by these two cytokines. In spleen of large yellow croaker, IL-8 level was found to be elevated at 3-6 hps whereas in head-kidney the level was higher from 12- 24 hps with poly I:C [7]. Positive stimulatory effect of poly I:C on IL-1β was also described in human dendritic cells and murine macrophage cell lines [25]. IL-8 in fish has been proved to mediate stimulated migration of neutrophils, macrophages, peripheral blood leucocytes and head-kidney leucocytes [26, 27]. Our result suggested that rohu IL-8 might play an important role in headkidney during viral infection by attracting immune cells to the site. An up-regulated TNF-β at 96 hps in rohu HKLs indicated a late response of this molecule to the viral imitator in comparison to other cytokines. However, in addition to interferon mediated anti-viral immunity, viral infection also induces expression of TNF and other chemokines [9]. Poly I:C, the synthetic analog of double stranded RNA virus is recognized by toll-like receptor 3 (TLR3) which activates a number of signal transduction pathways and upregulates an array of immune genes [28]. In in silico analysis, rohu TLR3 has been found to possess key binding domains for poly I: C and dsRNA of fish reovirus [29]. Therefore, it is possible that rohu TLR3 alone or along with other TLR homologues might play a crucial role in recognizing poly I:C and regulating expression level of cytokines. Since IL-6 together with TNF-α and IL-1β constitutes the group of first cytokines to be produced in host upon exposure to pathogen attack, their expression including that of IL-8 at almost 24 hps or after that indicates a late initiation of cytokine cascade in rohu HKLs upon viral infection.
Conclusion
Our study shows that in rohu, poly I:C is well capable of
inducing anti-viral immunity in HKLs by stimulating expression
of pro-inflammatory cytokines. Among the four cytokines
studied, IL-1β and IL-8 were up-regulated earlier followed by
IL-6 and TNF-α. This work also suggests that interferons, the core
anti-viral molecules are not the only molecules to be involved in
anti-viral immunity. However, studies in vivo will further help to
understand the underlying mechanism of the immunity provided
by these cytokines following viral infection.
Acknowledgements
Authors are thankful to the Director, Central Institute of
Freshwater Aquaculture, Kausalyaganga, Bhubaneswar, India for
providing necessary facilities during this study.
Declarations
Conflict of interest
All authors declare that they have no conflicts of
interest related to the work presented in this article.
Ethical approval
All the animal experiments were carried out according
to the Institute ethical committee.
ReferencesTop
- Tanekhy M, Matsuda S, Itano T, Kawakami H, Kono T, Sakai M. Expression of cytokine genes in head kidney and spleen cells of Japaneseflounder (Paralichthys olivaceus) infected with Nocardia seriolae. Vet Immunol Immunopathol. 2010;134(3-4):178–183. doi: 10.1016/j.vetimm.2009.09.001
- Sakai M. Current research status of fish immunostimulants. Aquaculture. 1999;172(1-2):63–92.
- Covello JM, BirdS, Morrison RN, Battaglene SC, Secombes CJ, Nowak BF. Cloning and expression analysis of three striped trumpeter (Latrislineata) pro-inflammatory cytokines, TNF-a, IL-1b and IL-8, in response to infection by the ectoparasitic, Chondracanthusgoldsmidi. Fish and Shellfish Immunology. 2009;26:773–786.
- Nam B, Byon J, Kim Y, Park E, Cho Y, Cheong J. Molecular cloning and characterisation of the flounder(Paralichthy solivaceus) interleukin-6 gene. Fish and Shellfish Immunology. 2007;23(1):231-236. doi: 10.1016/j.fsi.2006.10.001
- Bird S, Zou J, Savan R, Kono T, Sakai M, Woo J, et al. Characterisation and expression analysis of an interleukin 6 homologue in the Japanese pufferfish, Fugu rubripes. Dev Comp Immunol. 2005;29(9):775–789. doi: 10.1016/j.dci.2005.01.002
- Varela M, Dios S, Novoa B, Figueras A. Characterisation, expression and ontogeny of interleukin-6 and its receptors in zebrafish (Danio rerio). Dev Comp Immunol. 2012;37(1):97–106. doi: 10.1016/j.dci.2011.11.004
- Li C, Yao CL. Molecular and expression characterizations of interleukin-8 gene in large yellow croaker (Larimichthys crocea). Fish and Shellfish Immunol. 2013;34(3):799-809. doi:10.1016/j.fsi.2012.12.019
- Mladineo I, Block BA. Expression of cytokines IL-1β and TNF-α in tissues and cysts surrounding Didymocystis wedli (Digenea, Didymozoidae) in the Pacific bluefin tuna (Thunnus orientalis). Fish and Shellfish Immunology. 2010;29(3):487-493. doi:10.1016/j.fsi.2010.05.008
- Verriera ER, Langevin C, Benmansour A, Boudinot P. Early antiviral response and virus-induced genes in fish. Dev Comp Immunol. 2011;35(12):1204–1214. doi:10.1016/j.dci.2011.03.012
- FAO. Food and Agriculture Organization of the United Nations: The State of World Fisheries and Aquaculture, (Rome).2013.
- Fierro-Castro C, Barrioluengo L, López-Fierro P, Razquin BE, Carracedo B, Villena AJ. Fish cell cultures as in vitro models of pro-inflammatory responses elicited by immunostimulants. Fish Shellfish Immunol. 2012;33(2):389-400. doi:10.1016/j.fsi.2012.05.019
- Harun NO, Costa MM, Secombes CJ, Wang T. Sequencing of a second interleukin-10 gene in rainbow trout Oncorhynchus mykiss and comparative investigation of the expression and modulation of the paralogues in vitro and in vivo. Fish Shellfish Immunol. 2011;31(1):107-117. doi:10.1016/j.fsi.2011.04.010
- Monte MM, Wang T, Holland JW, Zou J, Secombes CJ. Cloning and characterization of rainbow trout interleukin-17A/F2 (IL-17A/F2) and IL-17 Receptor A: Expression during infection and bioactivity of recombinant IL-17A/F2. Infect Immun. 2013;81(1):340-353. doi:10.1128/IAI.00599-12
- Lu D, Bei J, Feng L, Zhang Y, Liu X, Wang L, et al. Interleukin-1β gene in orange-spotted grouper, Epinephelus coioides: Molecular cloning, expression, biological activities and signal transduction. Mol Immunol. 2008;45(4):857–867. doi: 10.1016/j.molimm.2007.08.009
- Seppola M, Larsen AN, Steiro K, Robertsen B, Jensen I. Characterization and expression analysis of the interleukin genes, IL-1β, IL-8 and IL-10 in Atlantic cod (Gadus morhua L.). Mol Immunol. 2008;45(4):887–897.doi: 10.1016/j.molimm.2007.08.003
- KarB, Mohanty J, Hemaprasanth KP, Sahoo PK. The immune response in rohu, Labeo rohita (Actinopterygii: Cyprinidae) to Argulus siamensis (Branchiura: Argulidae) infection: kinetics of immune gene expression and innate immune response. Aquaculture Resarch. 2013. doi: 10.1111/are.12279
- Robinson N, Sahoo PK, Baranski M, Mahapatra KD, Saha JN, Das S, et al. Expressed sequences and polymorphisms in rohu carp (Labeo rohita, Hamilton) revealed by mRNA-seq. Mar Biotechnol (NY). 2012;14(5):620-633. doi: 10.1007/s10126-012-9433-8
- Dash P, Sahoo PK, Gupta PK, Garg LC, Dixit A. Immune responses and protective efficacy of recombinant outer membrane protein R (rOmpR)-based vaccine of Aeromonas hydrophila with a modified adjuvant formulation in rohu (Labeo rohita). Fish Shellfish Immunol. 2014;39(2):512-523. doi:10.1016/j.fsi.2014.06.007
- Sahoo PK, Das S, Mahapatra KD, Saha JN, Baranski M, Ødegård J, et al. Characterization of the ceruloplasmin gene and its potential role as an indirect marker for selection to Aeromonas hydrophila resistance in rohu, Labeo rohita. Fish Shellfish Immunol. 2013;34(5):1325-1334. doi:10.1016/j.fsi.2013.02.020
- Ramakers C, Ruijter JM, Deprez RH, Moorman AF. Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neurosci Lett. 2003;339(1):62-66.
- Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods. 2001;25(4):402-408. doi:10.1006/meth.2001.1262
- Castellana B, Marín-Juez R, Planas JV. Transcriptional regulation of the gilthead seabream (Sparus aurata) interleukin-6 gene promoter. Fish and Shellfish Immunology. 2013;35(1):71-78.
- Laing KJ, Secombes CJ, Chemokines. Developmental and Comparative Immunology. 2004;28(5):443-460.
- Purcell MK, Kurath G, Garver KA, Herwig RP. Winton JR. Quantitative expression profiling of immune response genes in rainbow trout following infectious haematopoietic necrosis virus (IHNV) infection or DNA vaccination. Fish Shellfish Immunol. 2004;17(5):447-462. doi:10.1016/j.fsi.2004.04.017
- Paulnock DM, Demick KP, Coller SP. Analysis of interferon gamma-dependent and -independent pathways of macrophage activation. Journal of Leukocyte Biology. 2000;67:677–682.
- Sun JS, Zhao L, Sun L. Interleukin-8 of Cynoglossus semilaevis is a chemoattractant with immunoregulatory property. Fish Shellfish Immunol. 2011;30(6):1362-1367
- Harun NO, Zou J, Zhang YA, Nie P, Secombes CJ. The biological effects of rainbow trout (Oncorhynchus mykiss) recombinant interleukin-8. Developmental and Comparative Immunology. 2008;32(6):673-681. doi: 10.1016/j.dci.2007.10.005
- GreenTJ, Montagnani C. Poly I:C induces a protective antiviral immune response in the Pacific oyster (Crassostrea gigas) against subsequent challenge with Ostreid herpesvirus (OsHV-1 μvar). Fish Shellfish Immunol. 2013;35(2):382–388. doi:10.1016/j.fsi.2013.04.051
- Sahoo BR, Basu M, Swain B, Maharana J, Dixit MR, Jayasankar P, et al. Structural insights of rohu TLR3, its binding site analysis with fish reovirus dsRNA, poly I:C and zebrafish TRIF. Int J Biol Macromol. 2012;51(4):531-543. doi: 10.1016/j.ijbiomac.2012.06.005